Find longest repetitive sequence in a string
Data Structures & Algorithms practice on Codemia
Step through 300 algorithm problems with animated visualisers that show the data structure changing as the code runs.
Introduction
Finding the longest repetitive sequence within a string is a common problem in computer science, particularly in fields such as bioinformatics, data compression, and text processing. The challenge is to efficiently identify the longest contiguous sequence of characters that appear more than once in a given string.
Problem Definition
Given a string `S`, the objective is to determine the longest substring that is repeated two or more times. For example, in the string `"banana"`, the longest substring that appears more than once is `"ana"`.
Technical Explanation
Approaches to Solve the Problem
Several algorithms can address this problem, each with distinct time and space complexities.
1. Naive Approach
The simplest approach is to use two nested loops to create all possible substrings and then check for repetitions. While straightforward, it is highly inefficient with a time complexity of , where is the length of the string.
- Suffix Array: A sorted array of all suffixes of a string.
- LCP Array: An array where each value represents the longest common prefix length between consecutive suffixes in the suffix array.
- Suffixes: `["banana", "anana", "nana", "ana", "na", "a"]`
- Sorted Suffixes: `["a", "ana", "anana", "banana", "na", "nana"]`
- Suffix Array: `[5, 3, 1, 0, 4, 2]`
- LCP Array: `[1, 3, 0, 0, 2]`
- Longest Repeated Substring: `"ana"`
- Bioinformatics: Identifying repeated sequences can assist in DNA sequence analysis.
- Data Compression: Detecting redundancy can optimize storage.
- Text Processing: Useful in plagiarism detection and data deduplication.
Related reading
- find lowest index of a given value in a presorted array
- Find maximum value in an array by recursion
- Find median in binary search tree
- Find median value from a growing set
- find median with minimum time in an array
- Find minimal Ai2 Bi2 when A and B are sorted
- Find minimum cost to convert array to arithmetic progression
- Find minimum number of iterations to reach a certain sum

DSA Fundamentals
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Data Structures & Algorithms practice on Codemia
Step through 300 algorithm problems with animated visualisers that show the data structure changing as the code runs.